Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim28Q62318 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim28Q62318 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim28Q62318 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim28Q62318 Gm24150-201ENSMUST00000082759 104 ntBASIC6.04□□□□□ -1.44
Trim28Q62318 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim28Q62318 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim28Q62318 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim28Q62318 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.04□□□□□ -1.44
Trim28Q62318 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.04□□□□□ -1.44
Trim28Q62318 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm25313-201ENSMUST00000101817 116 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm9427-201ENSMUST00000116187 651 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm14933-201ENSMUST00000118840 481 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm13720-201ENSMUST00000120741 196 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm3757-201ENSMUST00000125878 675 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm24939-201ENSMUST00000158325 137 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm4134-201ENSMUST00000173244 563 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm23287-201ENSMUST00000179427 116 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm23143-201ENSMUST00000180137 116 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm37095-201ENSMUST00000195421 205 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm2142-201ENSMUST00000197899 589 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Amd-ps5-201ENSMUST00000198406 989 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm43580-201ENSMUST00000202892 284 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Gm19134-201ENSMUST00000221203 487 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 AC168881.1-201ENSMUST00000226018 430 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Trim28Q62318 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim28Q62318 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Gm24871-201ENSMUST00000083099 116 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Rnu5g-201ENSMUST00000093721 116 ntBASIC6.03□□□□□ -1.44
Trim28Q62318 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim28Q62318 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim28Q62318 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim28Q62318 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim28Q62318 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim28Q62318 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
Trim28Q62318 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim28Q62318 Gm14304-201ENSMUST00000117272 446 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm14621-201ENSMUST00000117709 689 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm14352-201ENSMUST00000119250 449 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm15120-201ENSMUST00000120602 301 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm13339-201ENSMUST00000120651 510 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm13232-201ENSMUST00000121816 632 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm15038-201ENSMUST00000122144 296 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Gm23467-201ENSMUST00000157127 159 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm24854-201ENSMUST00000158025 98 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm22536-201ENSMUST00000158171 134 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm8224-201ENSMUST00000166178 497 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Gm18415-201ENSMUST00000177464 647 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm16378-201ENSMUST00000179168 342 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm23186-201ENSMUST00000180078 107 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Mir7074-201ENSMUST00000183884 63 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm37682-201ENSMUST00000191776 522 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm37996-201ENSMUST00000191859 367 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm37881-201ENSMUST00000193001 421 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Gm4734-201ENSMUST00000200117 777 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Gm45081-201ENSMUST00000206281 572 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 AC166358.6-201ENSMUST00000221834 1206 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 AC155305.1-201ENSMUST00000222207 319 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC6.02□□□□□ -1.45
Trim28Q62318 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim28Q62318 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim28Q62318 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim28Q62318 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim28Q62318 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
Trim28Q62318 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim28Q62318 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim28Q62318 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms