Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm14586-201ENSMUST00000119571 408 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm12379-201ENSMUST00000119607 391 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm24898-201ENSMUST00000158133 106 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Mir6414-201ENSMUST00000183685 82 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm28614-201ENSMUST00000186483 458 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm43825-201ENSMUST00000199650 734 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm17887-201ENSMUST00000200194 547 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm44845-201ENSMUST00000208773 335 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3bQ3ULL6 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm14788-201ENSMUST00000119457 375 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm12884-201ENSMUST00000120371 325 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm15075-201ENSMUST00000122187 477 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm14473-201ENSMUST00000122269 557 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm23554-201ENSMUST00000157818 110 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm17159-201ENSMUST00000169043 482 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Mir6374-201ENSMUST00000184003 107 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Mir6943-201ENSMUST00000185186 66 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm28304-201ENSMUST00000185977 312 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm29256-201ENSMUST00000189094 312 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm29552-201ENSMUST00000190548 660 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm28484-201ENSMUST00000190606 312 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm43044-201ENSMUST00000198091 379 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm45006-201ENSMUST00000206078 690 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm46996-201ENSMUST00000220924 408 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Mir28a-201ENSMUST00000083560 86 ntBASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3bQ3ULL6 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm23481-201ENSMUST00000104173 131 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm21991-201ENSMUST00000180006 508 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm27695-201ENSMUST00000184301 91 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Mir6418-201ENSMUST00000185075 115 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.36□□□□□ -1.71
Upf3bQ3ULL6 Gm28997-201ENSMUST00000188759 429 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms