Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm24239-201ENSMUST00000157791 255 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm25264-201ENSMUST00000158519 117 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm3077-201ENSMUST00000165903 627 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm28625-201ENSMUST00000188309 205 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm44023-201ENSMUST00000203710 469 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.42□□□□□ -1.7
Trim43aQ3TL54 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm15916-201ENSMUST00000118355 736 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm14933-201ENSMUST00000118840 481 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm11866-201ENSMUST00000120209 335 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm16303-201ENSMUST00000161498 390 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm29588-201ENSMUST00000185738 298 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm28859-201ENSMUST00000186650 616 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm7381-201ENSMUST00000098958 300 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim43aQ3TL54 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim43aQ3TL54 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.4□□□□□ -1.7
Trim43aQ3TL54 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Trim43aQ3TL54 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.4□□□□□ -1.7
Trim43aQ3TL54 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
Trim43aQ3TL54 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim43aQ3TL54 Gm15385-201ENSMUST00000118725 667 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm22536-201ENSMUST00000158171 134 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm28094-201ENSMUST00000185262 390 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm38080-201ENSMUST00000194035 268 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm43649-201ENSMUST00000196596 391 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm43710-201ENSMUST00000199583 452 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm44371-201ENSMUST00000204148 467 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm45031-201ENSMUST00000206800 288 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm45710-201ENSMUST00000212847 215 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm26449-201ENSMUST00000082452 104 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.4□□□□□ -1.71
Trim43aQ3TL54 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.39□□□□□ -1.71
Trim43aQ3TL54 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.39□□□□□ -1.71
Trim43aQ3TL54 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.39□□□□□ -1.71
Trim43aQ3TL54 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.39□□□□□ -1.71
Trim43aQ3TL54 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim43aQ3TL54 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms