Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp39Q3TIX9 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp39Q3TIX9 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.05□□□□□ -1.6
Usp39Q3TIX9 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Mir466n-201ENSMUST00000104798 94 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Mir1188-201ENSMUST00000116756 120 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm11914-201ENSMUST00000117094 507 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm12683-201ENSMUST00000117528 415 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm12268-201ENSMUST00000118398 442 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm15034-201ENSMUST00000120043 349 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm13162-201ENSMUST00000121481 454 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm21729-201ENSMUST00000180058 664 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm21853-201ENSMUST00000180071 664 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm6717-201ENSMUST00000185549 838 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm18448-201ENSMUST00000186286 599 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm29495-201ENSMUST00000189319 664 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm3148-201ENSMUST00000203594 612 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm5001-201ENSMUST00000204361 331 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm45226-201ENSMUST00000206602 288 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm45034-201ENSMUST00000206831 482 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm29920-201ENSMUST00000206876 754 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm18904-201ENSMUST00000218756 329 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm40692-201ENSMUST00000220411 491 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm23508-201ENSMUST00000083079 72 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Mir31-201ENSMUST00000083474 106 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.04□□□□□ -1.6
Usp39Q3TIX9 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm22266-201ENSMUST00000104011 138 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm16394-201ENSMUST00000117289 675 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm11692-201ENSMUST00000122121 902 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm22199-201ENSMUST00000122660 126 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm16362-201ENSMUST00000135189 214 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm23537-201ENSMUST00000157536 330 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm9892-201ENSMUST00000182415 992 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Mir7087-201ENSMUST00000184840 70 ntBASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp39Q3TIX9 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms