Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm18505-201ENSMUST00000187360 790 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm3496-201ENSMUST00000188283 745 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC7.07□□□□□ -1.28
Col17a1Q07563 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm5374-201ENSMUST00000222868 657 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 AC091783.5-201ENSMUST00000224928 671 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 AC158981.3-202ENSMUST00000228906 523 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm23058-201ENSMUST00000093703 107 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm44027-201ENSMUST00000203419 3480 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm45262-201ENSMUST00000209917 1463 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col17a1Q07563 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col17a1Q07563 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.07□□□□□ -1.28
Col17a1Q07563 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col17a1Q07563 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col17a1Q07563 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm25272-201ENSMUST00000104293 128 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm15231-201ENSMUST00000119174 447 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 n-R5s21-201ENSMUST00000122692 117 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm23617-201ENSMUST00000175410 95 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm29104-201ENSMUST00000186304 222 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.06□□□□□ -1.28
Col17a1Q07563 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm26379-202ENSMUST00000200225 132 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 AC124542.1-201ENSMUST00000205588 908 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm7588-201ENSMUST00000216866 571 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 AC114916.1-201ENSMUST00000228465 494 ntBASIC7.06□□□□□ -1.28
Col17a1Q07563 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col17a1Q07563 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col17a1Q07563 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm23747-201ENSMUST00000104228 131 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm15185-201ENSMUST00000117397 746 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm11349-201ENSMUST00000122209 1116 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm26424-201ENSMUST00000122530 104 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm43281-201ENSMUST00000202522 2704 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm35876-201ENSMUST00000205044 459 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm18903-201ENSMUST00000215343 480 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.05□□□□□ -1.28
Col17a1Q07563 AC139294.1-201ENSMUST00000226708 571 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm6177-201ENSMUST00000085589 465 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 AW046200-203ENSMUST00000211787 2479 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col17a1Q07563 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col17a1Q07563 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm6429-201ENSMUST00000117144 475 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms