Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm22314-201ENSMUST00000158007 281 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Mir1251-201ENSMUST00000175486 84 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm5885-202ENSMUST00000203357 528 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm26063-201ENSMUST00000083378 107 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx3-1P97436 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm25106-201ENSMUST00000122672 134 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm23782-201ENSMUST00000157939 120 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm17421-201ENSMUST00000167845 674 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm17060-201ENSMUST00000172394 824 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm37501-201ENSMUST00000192830 691 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm4248-201ENSMUST00000196905 316 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm42566-201ENSMUST00000197120 643 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm39197-201ENSMUST00000212069 457 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm45796-201ENSMUST00000212483 114 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm13712-201ENSMUST00000117484 2295 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.6□□□□□ -1.83
Nkx3-1P97436 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.6□□□□□ -1.83
Nkx3-1P97436 Gm4991-201ENSMUST00000118899 1552 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm15151-201ENSMUST00000117106 177 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm5133-201ENSMUST00000118940 1255 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm15212-201ENSMUST00000122403 466 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm24505-201ENSMUST00000157682 126 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm22156-201ENSMUST00000158409 141 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm25025-201ENSMUST00000175018 111 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm10292-201ENSMUST00000183142 581 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm28871-201ENSMUST00000186191 687 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm28967-201ENSMUST00000187351 281 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm29634-201ENSMUST00000188467 696 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm2427-201ENSMUST00000189121 881 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm28699-201ENSMUST00000189193 696 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm18547-201ENSMUST00000192439 811 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm38217-201ENSMUST00000194358 910 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 CT025523.1-201ENSMUST00000228318 694 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Mir34b-201ENSMUST00000083558 84 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm38264-201ENSMUST00000194850 2032 ntBASIC3.59□□□□□ -1.83
Nkx3-1P97436 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Nkx3-1P97436 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.59□□□□□ -1.84
Nkx3-1P97436 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Nkx3-1P97436 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Nkx3-1P97436 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
Nkx3-1P97436 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.59□□□□□ -1.84
Nkx3-1P97436 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Nkx3-1P97436 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Nkx3-1P97436 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms