Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm44527-202ENSMUST00000204519 1314 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm14647-201ENSMUST00000119392 680 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm22664-201ENSMUST00000158719 105 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm43155-201ENSMUST00000202661 494 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm19368-201ENSMUST00000221258 4424 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm4759-201ENSMUST00000183414 6622 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm43329-201ENSMUST00000200120 3232 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm14562-201ENSMUST00000129885 543 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm23540-201ENSMUST00000157543 164 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm24817-201ENSMUST00000093672 105 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
PrkdcP97313 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm14101-201ENSMUST00000121502 473 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm22156-201ENSMUST00000158409 141 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm7656-201ENSMUST00000182468 1004 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm27457-201ENSMUST00000184771 156 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm42832-201ENSMUST00000196361 745 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
PrkdcP97313 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm37745-201ENSMUST00000193304 8163 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PrkdcP97313 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
PrkdcP97313 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC2.7□□□□□ -1.98
PrkdcP97313 Gm23115-201ENSMUST00000158480 108 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm22857-201ENSMUST00000174969 134 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Stk-ps2-204ENSMUST00000187808 616 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Gm29218-205ENSMUST00000190846 615 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 AC159231.1-201ENSMUST00000225365 226 ntBASIC2.7□□□□□ -1.98
PrkdcP97313 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PrkdcP97313 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PrkdcP97313 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm20667-201ENSMUST00000175674 1930 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm38073-201ENSMUST00000195141 3665 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC2.69□□□□□ -1.98
PrkdcP97313 Mir3092-201ENSMUST00000174954 96 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Gm44927-201ENSMUST00000207573 716 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms