Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.34□□□□□ -1.55
Nphp4P59240 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Nphp4P59240 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Nphp4P59240 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nphp4P59240 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nphp4P59240 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nphp4P59240 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nphp4P59240 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC5.34□□□□□ -1.55
Nphp4P59240 Gm18352-201ENSMUST00000189113 902 ntBASIC5.34□□□□□ -1.55
Nphp4P59240 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.34□□□□□ -1.55
Nphp4P59240 AC123835.1-201ENSMUST00000214362 670 ntBASIC5.34□□□□□ -1.55
Nphp4P59240 Gm46138-201ENSMUST00000215294 426 ntBASIC5.34□□□□□ -1.55
Nphp4P59240 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nphp4P59240 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.34□□□□□ -1.55
Nphp4P59240 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nphp4P59240 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nphp4P59240 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Nphp4P59240 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nphp4P59240 Gm11448-201ENSMUST00000120427 450 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Gm11200-201ENSMUST00000121698 448 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.33□□□□□ -1.56
Nphp4P59240 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nphp4P59240 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nphp4P59240 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nphp4P59240 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nphp4P59240 Gm26746-201ENSMUST00000181722 487 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Gm27392-201ENSMUST00000185041 101 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Gm29334-201ENSMUST00000190334 357 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Gm37239-201ENSMUST00000193510 141 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nphp4P59240 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.33□□□□□ -1.56
Nphp4P59240 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nphp4P59240 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nphp4P59240 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nphp4P59240 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nphp4P59240 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nphp4P59240 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nphp4P59240 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nphp4P59240 Gm24935-201ENSMUST00000103770 110 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm10241-201ENSMUST00000117664 286 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm13690-201ENSMUST00000118989 285 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm26276-201ENSMUST00000157099 109 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm22219-201ENSMUST00000157562 319 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm22311-201ENSMUST00000158006 110 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.32□□□□□ -1.56
Nphp4P59240 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.32□□□□□ -1.56
Nphp4P59240 Gm38098-201ENSMUST00000194115 241 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm43276-201ENSMUST00000199712 364 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm44371-201ENSMUST00000204148 467 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm44294-201ENSMUST00000205090 728 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm18944-201ENSMUST00000207672 643 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm45498-201ENSMUST00000210346 283 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gm8231-201ENSMUST00000221617 783 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
Nphp4P59240 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nphp4P59240 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nphp4P59240 Snora7a-201ENSMUST00000082629 140 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nphp4P59240 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nphp4P59240 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nphp4P59240 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nphp4P59240 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nphp4P59240 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.32□□□□□ -1.56
Nphp4P59240 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nphp4P59240 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nphp4P59240 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nphp4P59240 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nphp4P59240 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nphp4P59240 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nphp4P59240 Gm15613-201ENSMUST00000118396 326 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm15361-201ENSMUST00000119320 444 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm11829-201ENSMUST00000121003 282 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm24730-201ENSMUST00000158228 117 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Spin2g-201ENSMUST00000178425 687 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.31□□□□□ -1.56
Nphp4P59240 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.31□□□□□ -1.56
Nphp4P59240 Gm6303-201ENSMUST00000210123 471 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm7380-201ENSMUST00000211599 466 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm7119-201ENSMUST00000221345 695 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Gm8724-201ENSMUST00000081668 483 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Mir193a-201ENSMUST00000083461 66 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.31□□□□□ -1.56
Nphp4P59240 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.31□□□□□ -1.56
Nphp4P59240 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nphp4P59240 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nphp4P59240 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nphp4P59240 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nphp4P59240 Gm15926-201ENSMUST00000120492 550 ntBASIC5.31□□□□□ -1.56
Nphp4P59240 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nphp4P59240 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms