Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.16□□□□□ -1.74
Sox3P53784 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sox3P53784 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sox3P53784 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sox3P53784 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sox3P53784 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Sox3P53784 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sox3P53784 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Sox3P53784 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.15□□□□□ -1.74
Sox3P53784 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sox3P53784 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sox3P53784 Gm14621-201ENSMUST00000117709 689 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Gm12379-201ENSMUST00000119607 391 ntBASIC4.15□□□□□ -1.75
Sox3P53784 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sox3P53784 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.15□□□□□ -1.75
Sox3P53784 Gm23782-201ENSMUST00000157939 120 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Gm22243-201ENSMUST00000178754 120 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Gm24520-201ENSMUST00000179510 110 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.15□□□□□ -1.75
Sox3P53784 Gm8790-201ENSMUST00000194108 322 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Gm43828-201ENSMUST00000196890 639 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Sox3P53784 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.15□□□□□ -1.75
Sox3P53784 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.15□□□□□ -1.75
Sox3P53784 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.15□□□□□ -1.75
Sox3P53784 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sox3P53784 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sox3P53784 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sox3P53784 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sox3P53784 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.15□□□□□ -1.75
Sox3P53784 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.15□□□□□ -1.75
Sox3P53784 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Sox3P53784 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.15□□□□□ -1.75
Sox3P53784 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.15□□□□□ -1.75
Sox3P53784 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sox3P53784 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sox3P53784 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sox3P53784 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sox3P53784 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm15364-201ENSMUST00000119618 585 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Gm24553-201ENSMUST00000158653 131 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm28830-201ENSMUST00000188192 213 ntBASIC4.14□□□□□ -1.75
Sox3P53784 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.14□□□□□ -1.75
Sox3P53784 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.14□□□□□ -1.75
Sox3P53784 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.14□□□□□ -1.75
Sox3P53784 AC154730.1-201ENSMUST00000227874 816 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sox3P53784 Gm7117-201ENSMUST00000071515 387 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Gm10794-201ENSMUST00000099624 207 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sox3P53784 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.14□□□□□ -1.75
Sox3P53784 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sox3P53784 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox3P53784 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Snora64-201ENSMUST00000104521 134 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm8051-201ENSMUST00000120464 466 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Gm15212-201ENSMUST00000122403 466 ntBASIC4.13□□□□□ -1.75
Sox3P53784 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox3P53784 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm16545-201ENSMUST00000161968 463 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm17152-201ENSMUST00000172430 535 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm25999-201ENSMUST00000175398 133 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sox3P53784 Gm27033-201ENSMUST00000183226 544 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm27315-201ENSMUST00000183977 154 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm27695-201ENSMUST00000184301 91 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm27457-201ENSMUST00000184771 156 ntBASIC4.13□□□□□ -1.75
Sox3P53784 Gm19774-201ENSMUST00000190667 114 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms