Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox1P53783 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sox1P53783 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.9□□□□□ -1.47
Sox1P53783 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Sox1P53783 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Sox1P53783 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm13567-201ENSMUST00000118026 247 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm12040-201ENSMUST00000118357 537 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm11972-201ENSMUST00000118514 389 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm14001-201ENSMUST00000118847 247 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm14998-201ENSMUST00000120502 495 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm14037-201ENSMUST00000120576 313 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm6175-201ENSMUST00000121351 400 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm11363-201ENSMUST00000121672 548 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm25335-201ENSMUST00000158043 103 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm26024-201ENSMUST00000158657 322 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm6520-201ENSMUST00000200636 410 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm43919-201ENSMUST00000204303 364 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm44611-201ENSMUST00000207507 355 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm18442-201ENSMUST00000220925 639 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm17890-201ENSMUST00000221419 757 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm5341-201ENSMUST00000058881 489 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox1P53783 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox1P53783 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm26056-201ENSMUST00000083043 104 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Gm24446-201ENSMUST00000083982 156 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox1P53783 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.89□□□□□ -1.47
Sox1P53783 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox1P53783 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox1P53783 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox1P53783 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sox1P53783 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox1P53783 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Mir208b-201ENSMUST00000104735 77 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm11975-201ENSMUST00000118772 481 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm25706-201ENSMUST00000157828 247 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm23700-201ENSMUST00000158842 102 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm20480-201ENSMUST00000173953 250 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm23977-201ENSMUST00000177871 74 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm22584-201ENSMUST00000177935 92 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Gm28683-201ENSMUST00000187134 615 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm28066-201ENSMUST00000188657 472 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm28840-205ENSMUST00000189320 615 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm28835-203ENSMUST00000190062 615 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox1P53783 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.88□□□□□ -1.47
Sox1P53783 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.88□□□□□ -1.47
Sox1P53783 Gm45700-201ENSMUST00000205866 347 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox1P53783 Gm44794-201ENSMUST00000206550 411 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm8523-201ENSMUST00000211386 552 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm7380-201ENSMUST00000211599 466 ntBASIC5.88□□□□□ -1.47
Sox1P53783 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox1P53783 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox1P53783 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms