Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm26169-201ENSMUST00000158420 135 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx2-1P50220 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm17081-201ENSMUST00000167363 478 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm5139-201ENSMUST00000175943 249 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm18397-201ENSMUST00000176704 587 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm2092-201ENSMUST00000178887 639 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm2759-201ENSMUST00000179938 639 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm25942-201ENSMUST00000180080 110 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Mir7012-201ENSMUST00000183900 64 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm28116-201ENSMUST00000189064 387 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm37599-201ENSMUST00000193067 489 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm18036-201ENSMUST00000195256 272 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm21006-201ENSMUST00000196930 667 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Igkv3-8-201ENSMUST00000197635 339 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm43408-201ENSMUST00000198263 440 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm44816-201ENSMUST00000206666 477 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm34005-201ENSMUST00000215834 282 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm24525-201ENSMUST00000082917 151 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm25187-201ENSMUST00000083906 133 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Mir504-201ENSMUST00000093602 79 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx2-1P50220 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.82□□□□□ -1.8
Nkx2-1P50220 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Nkx2-1P50220 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Mir669o-201ENSMUST00000103898 96 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm10552-201ENSMUST00000113396 372 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Mir466j-201ENSMUST00000116876 122 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm12571-201ENSMUST00000118132 243 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm11804-201ENSMUST00000121663 468 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm13131-201ENSMUST00000122228 321 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm5401-201ENSMUST00000122444 365 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm26254-201ENSMUST00000122491 118 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm24628-201ENSMUST00000122761 289 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm24664-201ENSMUST00000158939 100 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm5929-201ENSMUST00000166883 487 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm9890-201ENSMUST00000171867 537 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm28017-201ENSMUST00000183434 126 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm27457-201ENSMUST00000184771 156 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm37881-201ENSMUST00000193001 421 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm37095-201ENSMUST00000195421 205 ntBASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx2-1P50220 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx2-1P50220 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms