Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm38097-201ENSMUST00000192936 439 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm37418-201ENSMUST00000195031 274 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm3010-201ENSMUST00000198805 448 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 AC160114.2-201ENSMUST00000223021 300 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Sdc1P18828 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm23058-201ENSMUST00000093703 107 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Sdc1P18828 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm11843-201ENSMUST00000118984 425 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm13687-201ENSMUST00000119857 282 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm11398-201ENSMUST00000120330 320 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Clec2f-201ENSMUST00000121051 374 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.48□□□□□ -1.85
Sdc1P18828 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm11507-201ENSMUST00000156462 412 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm23231-201ENSMUST00000157299 104 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm24689-201ENSMUST00000157760 104 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm24751-201ENSMUST00000157844 102 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm26460-201ENSMUST00000175061 126 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm4842-201ENSMUST00000183237 835 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Mir6393-201ENSMUST00000183709 94 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm27718-201ENSMUST00000183721 86 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm44349-201ENSMUST00000197048 123 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm38670-201ENSMUST00000199248 77 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm44665-201ENSMUST00000205381 251 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm17987-201ENSMUST00000206902 603 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Gm45392-201ENSMUST00000210441 214 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.48□□□□□ -1.85
Sdc1P18828 AC166358.3-201ENSMUST00000221456 181 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 AC125543.4-201ENSMUST00000223385 117 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm26176-201ENSMUST00000083795 105 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm9386-201ENSMUST00000095195 381 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sdc1P18828 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.48□□□□□ -1.85
Sdc1P18828 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Sdc1P18828 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sdc1P18828 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms