Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdx1P18111 Gm8264-201ENSMUST00000217801 465 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx1P18111 Gm46191-201ENSMUST00000218899 433 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Gm8158-201ENSMUST00000219220 465 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Gm8112-201ENSMUST00000219637 465 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 AC157515.1-201ENSMUST00000220953 450 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 AC154305.3-201ENSMUST00000224661 552 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
Cdx1P18111 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx1P18111 n-R5s170-201ENSMUST00000083726 113 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Mir199a-2-201ENSMUST00000093618 110 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdx1P18111 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Cdx1P18111 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdx1P18111 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC3.69□□□□□ -1.82
Cdx1P18111 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdx1P18111 AC134860.3-201ENSMUST00000223564 1300 ntBASIC3.69□□□□□ -1.82
Cdx1P18111 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdx1P18111 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 BC051076-202ENSMUST00000199477 2868 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm24715-201ENSMUST00000102377 95 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm24935-201ENSMUST00000103770 110 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm22020-201ENSMUST00000104358 136 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm8145-201ENSMUST00000118220 745 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm13314-201ENSMUST00000118742 335 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm11890-201ENSMUST00000119585 417 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm13452-201ENSMUST00000120896 1097 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm12007-201ENSMUST00000120978 597 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm14122-201ENSMUST00000122076 973 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 Gm16331-201ENSMUST00000144274 498 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.68□□□□□ -1.82
Cdx1P18111 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.68□□□□□ -1.82
Cdx1P18111 Gm23957-201ENSMUST00000157209 90 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm22600-201ENSMUST00000157598 269 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm25655-201ENSMUST00000158465 290 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Ear-ps9-201ENSMUST00000161963 460 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm6647-201ENSMUST00000170514 641 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm8214-201ENSMUST00000172123 351 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm8221-201ENSMUST00000178052 564 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm27528-201ENSMUST00000183544 205 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm28191-201ENSMUST00000189112 211 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm5511-201ENSMUST00000189380 802 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm29332-201ENSMUST00000190829 227 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm44952-201ENSMUST00000204443 433 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm44259-201ENSMUST00000204996 298 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm17811-201ENSMUST00000206193 387 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Gm20586-201ENSMUST00000210122 547 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdx1P18111 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdx1P18111 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdx1P18111 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdx1P18111 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdx1P18111 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cdx1P18111 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC3.68□□□□□ -1.82
Cdx1P18111 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.68□□□□□ -1.82
Cdx1P18111 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdx1P18111 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm23942-201ENSMUST00000101956 107 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm25096-201ENSMUST00000104043 129 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm12328-201ENSMUST00000118611 197 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm14907-201ENSMUST00000121948 854 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm7855-201ENSMUST00000137737 687 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm26347-201ENSMUST00000157526 131 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm24898-201ENSMUST00000158133 106 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm25971-201ENSMUST00000158953 286 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm17081-201ENSMUST00000167363 478 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm28097-201ENSMUST00000187333 366 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm37632-201ENSMUST00000191811 1142 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms