Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm42886-201ENSMUST00000199214 466 ntBASIC6.13□□□□□ -1.43
RaraP11416 Igkv11-114-201ENSMUST00000200013 346 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 Gm45048-201ENSMUST00000207058 429 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm45049-201ENSMUST00000207586 591 ntBASIC6.13□□□□□ -1.43
RaraP11416 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm7990-201ENSMUST00000212126 593 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.13□□□□□ -1.43
RaraP11416 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.13□□□□□ -1.43
RaraP11416 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RaraP11416 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RaraP11416 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.13□□□□□ -1.43
RaraP11416 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RaraP11416 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RaraP11416 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm22371-201ENSMUST00000104588 130 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm13650-201ENSMUST00000117729 433 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm11908-201ENSMUST00000117755 347 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm14046-201ENSMUST00000119389 509 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm25806-201ENSMUST00000122782 122 ntBASIC6.12□□□□□ -1.43
RaraP11416 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.12□□□□□ -1.43
RaraP11416 Gm23465-201ENSMUST00000157134 262 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm26170-201ENSMUST00000158419 148 ntBASIC6.12□□□□□ -1.43
RaraP11416 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Mir6238-201ENSMUST00000184140 129 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gm29134-201ENSMUST00000186579 126 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm29519-201ENSMUST00000186994 398 ntBASIC6.12□□□□□ -1.43
RaraP11416 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Gm28241-201ENSMUST00000190916 235 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm4322-201ENSMUST00000191094 336 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm37191-201ENSMUST00000193346 388 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm412-201ENSMUST00000193360 948 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm43718-201ENSMUST00000197524 1857 ntBASIC6.12□□□□□ -1.43
RaraP11416 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.12□□□□□ -1.43
RaraP11416 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC6.12□□□□□ -1.43
RaraP11416 Gm44091-201ENSMUST00000205212 649 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm45026-201ENSMUST00000205292 833 ntBASIC6.12□□□□□ -1.43
RaraP11416 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm44847-201ENSMUST00000207104 1991 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm44959-201ENSMUST00000209127 231 ntBASIC6.12□□□□□ -1.43
RaraP11416 Gm45405-201ENSMUST00000211544 609 ntBASIC6.12□□□□□ -1.43
RaraP11416 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RaraP11416 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Gm18592-201ENSMUST00000221529 276 ntBASIC6.12□□□□□ -1.43
RaraP11416 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.12□□□□□ -1.43
RaraP11416 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.12□□□□□ -1.43
RaraP11416 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RaraP11416 AC126690.1-201ENSMUST00000228898 397 ntBASIC6.12□□□□□ -1.43
RaraP11416 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RaraP11416 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Fus-202ENSMUST00000079045 2623 ntBASIC6.12□□□□□ -1.43
RaraP11416 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
RaraP11416 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RaraP11416 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms