Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col1a1P11087 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col1a1P11087 Gm11971-201ENSMUST00000117715 288 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col1a1P11087 Mir1934-201ENSMUST00000158127 83 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Mir7578-201ENSMUST00000183455 82 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Gm27158-201ENSMUST00000183813 238 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.66□□□□□ -1.66
Col1a1P11087 Gm9309-201ENSMUST00000223537 546 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col1a1P11087 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col1a1P11087 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Col1a1P11087 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Col1a1P11087 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.66□□□□□ -1.66
Col1a1P11087 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col1a1P11087 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col1a1P11087 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col1a1P11087 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col1a1P11087 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col1a1P11087 Gm5060-201ENSMUST00000120072 599 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Gm15166-201ENSMUST00000120790 385 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.65□□□□□ -1.66
Col1a1P11087 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col1a1P11087 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col1a1P11087 Gm28390-201ENSMUST00000185212 700 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Gm28190-201ENSMUST00000189766 722 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.65□□□□□ -1.66
Col1a1P11087 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Gm44513-201ENSMUST00000206811 439 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col1a1P11087 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.65□□□□□ -1.66
Col1a1P11087 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col1a1P11087 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col1a1P11087 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col1a1P11087 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.65□□□□□ -1.67
Col1a1P11087 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col1a1P11087 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col1a1P11087 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col1a1P11087 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col1a1P11087 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col1a1P11087 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col1a1P11087 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col1a1P11087 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm11566-201ENSMUST00000118550 203 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Gm11281-201ENSMUST00000141391 576 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.64□□□□□ -1.67
Col1a1P11087 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm37617-201ENSMUST00000194309 159 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Gm7639-201ENSMUST00000212608 484 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col1a1P11087 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm23518-201ENSMUST00000082835 153 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col1a1P11087 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col1a1P11087 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col1a1P11087 Fus-202ENSMUST00000079045 2623 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col1a1P11087 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm38128-201ENSMUST00000192085 3250 ntBASIC4.64□□□□□ -1.67
Col1a1P11087 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col1a1P11087 Gm3788-201ENSMUST00000119949 136 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 Gm12691-201ENSMUST00000120186 456 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.63□□□□□ -1.67
Col1a1P11087 Gm6625-201ENSMUST00000177870 272 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.63□□□□□ -1.67
Col1a1P11087 Gm27249-201ENSMUST00000185049 328 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 Gm44824-201ENSMUST00000207021 229 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.63□□□□□ -1.67
Col1a1P11087 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 Gm19154-201ENSMUST00000223330 940 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col1a1P11087 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Col1a1P11087 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.63□□□□□ -1.67
Col1a1P11087 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col1a1P11087 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms