Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mir1900-201ENSMUST00000122714 78 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm14747-201ENSMUST00000149888 984 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm22214-201ENSMUST00000157563 172 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm26320-201ENSMUST00000157742 306 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm23078-201ENSMUST00000157848 148 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm26353-201ENSMUST00000158224 255 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm8807-201ENSMUST00000179328 492 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm27158-201ENSMUST00000183813 238 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm2623-201ENSMUST00000199229 286 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxd3P09027 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm12691-201ENSMUST00000120186 456 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm22428-201ENSMUST00000158554 132 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm3170-201ENSMUST00000168753 850 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm4152-201ENSMUST00000172675 259 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm20630-201ENSMUST00000177387 551 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm3348-201ENSMUST00000177813 850 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Mir6348-201ENSMUST00000183804 120 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm29350-201ENSMUST00000189141 541 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm9710-201ENSMUST00000198053 499 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm43651-201ENSMUST00000199796 439 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm7128-201ENSMUST00000211639 533 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm22571-201ENSMUST00000082984 70 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm23848-201ENSMUST00000083826 106 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm10205-201ENSMUST00000087431 234 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.09□□□□□ -1.59
Hoxd3P09027 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
Hoxd3P09027 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxd3P09027 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.6
Hoxd3P09027 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Hoxd3P09027 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hoxd3P09027 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Hoxd3P09027 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.08□□□□□ -1.6
Hoxd3P09027 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms