Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm44857-201ENSMUST00000208331 196 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm18924-201ENSMUST00000211929 316 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm7639-201ENSMUST00000212608 484 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 AL603630.1-201ENSMUST00000214781 147 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm6056-201ENSMUST00000221253 488 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm9269-201ENSMUST00000221661 578 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 CT030166.1-201ENSMUST00000222654 357 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm16415-201ENSMUST00000080097 489 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Olfr192-201ENSMUST00000080251 925 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm10916-201ENSMUST00000080330 483 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm6177-201ENSMUST00000085589 465 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Zfp640-202ENSMUST00000224116 1562 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Fus-202ENSMUST00000079045 2623 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm14909-201ENSMUST00000117853 351 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Mir1970-201ENSMUST00000157839 104 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm6808-201ENSMUST00000162341 807 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Mir6416-201ENSMUST00000183664 117 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm28094-201ENSMUST00000185262 390 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm29600-201ENSMUST00000188687 377 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm29545-201ENSMUST00000188878 694 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm29641-201ENSMUST00000188955 259 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm29598-201ENSMUST00000188996 588 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm36998-201ENSMUST00000193205 704 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Mir142-201ENSMUST00000198092 64 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm4714-201ENSMUST00000203395 279 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm45157-201ENSMUST00000208729 401 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm7204-201ENSMUST00000062591 600 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm26163-201ENSMUST00000083792 178 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Shisa8J3QNX5 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm11912-201ENSMUST00000117235 264 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm14521-201ENSMUST00000119545 350 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm12074-201ENSMUST00000120189 219 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm11260-201ENSMUST00000121163 942 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm15488-201ENSMUST00000121682 670 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm22343-201ENSMUST00000122648 286 ntBASIC4.37□□□□□ -1.71
Shisa8J3QNX5 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms