Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Snord116l13-201ENSMUST00000177737 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25350-201ENSMUST00000177849 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l15-201ENSMUST00000177940 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm23446-201ENSMUST00000177977 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l4-201ENSMUST00000177982 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26201-201ENSMUST00000178047 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm24711-201ENSMUST00000178062 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm24609-201ENSMUST00000178166 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm23265-201ENSMUST00000178321 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22812-201ENSMUST00000178329 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l3-201ENSMUST00000178370 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26246-201ENSMUST00000178388 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22131-201ENSMUST00000178415 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25155-201ENSMUST00000178450 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm24760-201ENSMUST00000178530 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26032-201ENSMUST00000178535 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22285-201ENSMUST00000178576 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22417-201ENSMUST00000178656 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l2-201ENSMUST00000178675 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26270-201ENSMUST00000178690 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l16-201ENSMUST00000178777 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25074-201ENSMUST00000178782 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25210-201ENSMUST00000178813 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25157-201ENSMUST00000178914 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm23313-201ENSMUST00000178931 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l17-201ENSMUST00000178936 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm23089-201ENSMUST00000178947 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22046-201ENSMUST00000179027 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l10-201ENSMUST00000179053 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm24153-201ENSMUST00000179280 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25597-201ENSMUST00000179388 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l1-201ENSMUST00000179518 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22941-201ENSMUST00000179630 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22631-201ENSMUST00000179656 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25816-201ENSMUST00000179764 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l8-201ENSMUST00000179889 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l7-201ENSMUST00000179895 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l5-201ENSMUST00000179927 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l6-201ENSMUST00000179955 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26188-201ENSMUST00000179963 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25471-201ENSMUST00000180126 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26433-201ENSMUST00000180227 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l11-201ENSMUST00000180312 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm23862-201ENSMUST00000180342 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22128-201ENSMUST00000180346 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Mir6244-201ENSMUST00000184156 117 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm37418-201ENSMUST00000195031 274 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm5284-201ENSMUST00000199053 903 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm45312-201ENSMUST00000210566 311 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm18413-201ENSMUST00000221573 655 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm7042-201ENSMUST00000223027 384 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm24454-201ENSMUST00000083349 132 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Fus-202ENSMUST00000079045 2623 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm24265-201ENSMUST00000101833 141 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm25595-201ENSMUST00000102273 97 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm25111-201ENSMUST00000116686 147 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm11386-201ENSMUST00000117761 347 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.04□□□□□ -1.6
Pcdh1F7BJK1 Gm7079-201ENSMUST00000119726 171 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms