Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm13386-201ENSMUST00000117677 124 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm14753-201ENSMUST00000118503 246 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm12994-201ENSMUST00000119601 447 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm7363-201ENSMUST00000119883 399 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm12880-201ENSMUST00000120652 494 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm14784-201ENSMUST00000121604 663 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm22536-201ENSMUST00000158171 134 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm43828-201ENSMUST00000196890 639 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm43028-201ENSMUST00000202561 481 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Gm43580-201ENSMUST00000202892 284 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.92□□□□□ -1.62
Smc1aQ9CU62 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Smc1aQ9CU62 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm22498-201ENSMUST00000104497 86 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm12062-201ENSMUST00000117533 259 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm14750-201ENSMUST00000118262 516 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm12230-201ENSMUST00000118301 454 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm15603-201ENSMUST00000119252 492 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm12852-201ENSMUST00000119478 719 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm23789-201ENSMUST00000122536 301 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm29228-201ENSMUST00000185489 418 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm3145-201ENSMUST00000188584 220 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm43841-201ENSMUST00000199491 586 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm17956-201ENSMUST00000199931 838 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm3189-201ENSMUST00000205595 832 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.91□□□□□ -1.62
Smc1aQ9CU62 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.9□□□□□ -1.62
Smc1aQ9CU62 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Smc1aQ9CU62 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.9□□□□□ -1.62
Smc1aQ9CU62 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Smc1aQ9CU62 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Smc1aQ9CU62 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Smc1aQ9CU62 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm22613-201ENSMUST00000122679 292 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms