Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm23923-201ENSMUST00000104108 133 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm15026-201ENSMUST00000119219 458 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm14861-201ENSMUST00000119451 455 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm28655-201ENSMUST00000191538 692 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 AC140209.1-204ENSMUST00000226736 739 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm4987-201ENSMUST00000078326 408 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Mir30e-201ENSMUST00000083475 92 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm19176-201ENSMUST00000222149 1831 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm13787-201ENSMUST00000120422 168 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm22135-201ENSMUST00000158752 108 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm25480-201ENSMUST00000083217 133 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm11718-201ENSMUST00000119942 537 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm4725-201ENSMUST00000151048 587 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm8035-201ENSMUST00000204625 687 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm3565-201ENSMUST00000222670 609 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 AC170999.2-201ENSMUST00000226223 264 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm23518-201ENSMUST00000082835 153 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm4991-201ENSMUST00000118899 1552 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm7041-201ENSMUST00000201227 524 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm44754-201ENSMUST00000208155 400 ntBASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a6Q8C6K9 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm12095-201ENSMUST00000121962 816 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm43015-201ENSMUST00000199087 565 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm32381-201ENSMUST00000203192 476 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm6991-201ENSMUST00000218475 1178 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm23297-201ENSMUST00000083184 127 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm25818-201ENSMUST00000083282 164 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a6Q8C6K9 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms