Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Gm33973-201ENSMUST00000195148 534 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm9632-201ENSMUST00000195934 643 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm43350-201ENSMUST00000196382 711 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm7825-201ENSMUST00000204046 416 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.19□□□□□ -1.58
Ift88Q61371 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Zfp429-203ENSMUST00000224684 524 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ift88Q61371 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Fus-202ENSMUST00000079045 2623 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ift88Q61371 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ift88Q61371 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Gm11914-201ENSMUST00000117094 507 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm12873-201ENSMUST00000119988 422 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm23496-201ENSMUST00000157741 248 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm24395-201ENSMUST00000158139 125 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm16134-201ENSMUST00000161714 336 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm17085-201ENSMUST00000165425 502 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm6647-201ENSMUST00000170514 641 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.18□□□□□ -1.58
Ift88Q61371 Mir3080-201ENSMUST00000175010 79 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm20648-201ENSMUST00000175815 328 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm28017-201ENSMUST00000183434 126 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Mir6344-201ENSMUST00000183462 104 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm18728-201ENSMUST00000186155 753 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm19206-201ENSMUST00000186401 827 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.18□□□□□ -1.58
Ift88Q61371 Gm3145-201ENSMUST00000188584 220 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ift88Q61371 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Gm17953-201ENSMUST00000192061 667 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm36966-201ENSMUST00000192217 413 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm17893-201ENSMUST00000203017 770 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm2011-203ENSMUST00000203750 435 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm33601-201ENSMUST00000210001 961 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 AC153526.1-201ENSMUST00000219750 190 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.18□□□□□ -1.58
Ift88Q61371 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Ift88Q61371 Snora52-201ENSMUST00000082732 137 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Gm24707-201ENSMUST00000082812 107 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ift88Q61371 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.18□□□□□ -1.58
Ift88Q61371 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.18□□□□□ -1.58
Ift88Q61371 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ift88Q61371 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ift88Q61371 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.17□□□□□ -1.58
Ift88Q61371 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Ift88Q61371 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ift88Q61371 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Ift88Q61371 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Ift88Q61371 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm14365-201ENSMUST00000117535 587 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm13640-201ENSMUST00000118445 264 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm11804-201ENSMUST00000121663 468 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.17□□□□□ -1.58
Ift88Q61371 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm8358-201ENSMUST00000167222 555 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Mir3058-201ENSMUST00000175126 91 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm27659-201ENSMUST00000183472 98 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm28113-201ENSMUST00000188280 229 ntBASIC5.17□□□□□ -1.58
Ift88Q61371 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.17□□□□□ -1.58
Ift88Q61371 Gm28769-201ENSMUST00000190176 615 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms