Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm8289-201ENSMUST00000144814 1182 ntBASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Gm11507-201ENSMUST00000156462 412 ntBASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Gm24860-201ENSMUST00000158457 276 ntBASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Gm27037-201ENSMUST00000182270 960 ntBASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Gm37894-201ENSMUST00000195416 2599 ntBASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim41Q5NCC3 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC10.4□□□□□ -0.75
Trim41Q5NCC3 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC10.4□□□□□ -0.75
Trim41Q5NCC3 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim41Q5NCC3 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Trim41Q5NCC3 Gm8700-201ENSMUST00000222187 3054 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm8595-201ENSMUST00000118250 630 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm13064-201ENSMUST00000119125 557 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm14655-201ENSMUST00000120124 578 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm25439-201ENSMUST00000158280 131 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm37495-201ENSMUST00000194590 264 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm43405-201ENSMUST00000198642 337 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm18100-201ENSMUST00000200897 452 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm21112-201ENSMUST00000212224 578 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 AC108846.4-201ENSMUST00000216783 341 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 CT025689.4-201ENSMUST00000225926 601 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 AC162467.3-201ENSMUST00000219716 2172 ntBASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC10.39□□□□□ -0.75
Trim41Q5NCC3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm7925-201ENSMUST00000166690 401 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Mir5624-201ENSMUST00000176635 61 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm43157-201ENSMUST00000198223 412 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm7181-201ENSMUST00000202197 434 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm45048-201ENSMUST00000207058 429 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm45049-201ENSMUST00000207586 591 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm2059-201ENSMUST00000212025 287 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm20368-201ENSMUST00000220716 301 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 AC127371.1-201ENSMUST00000228516 312 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm43229-201ENSMUST00000201812 1850 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Gm45483-201ENSMUST00000209845 1682 ntBASIC10.38□□□□□ -0.75
Trim41Q5NCC3 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm42894-201ENSMUST00000200788 3390 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm29488-201ENSMUST00000191427 2402 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm25563-201ENSMUST00000104603 74 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm14790-201ENSMUST00000117760 1293 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm13567-201ENSMUST00000118026 247 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm15211-201ENSMUST00000118932 528 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm26172-201ENSMUST00000158421 134 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm23648-201ENSMUST00000180301 107 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms