Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24317-201ENSMUST00000178536 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm25021-201ENSMUST00000179184 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm22995-201ENSMUST00000179670 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm24424-201ENSMUST00000179714 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm24389-201ENSMUST00000179962 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm25672-201ENSMUST00000180111 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm28471-201ENSMUST00000185994 615 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm28598-201ENSMUST00000186490 615 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm29163-201ENSMUST00000188029 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm9541-201ENSMUST00000188409 502 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm29268-201ENSMUST00000188669 615 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm5368-201ENSMUST00000189012 589 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm29218-205ENSMUST00000190846 615 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm28978-201ENSMUST00000191120 615 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm28872-201ENSMUST00000191518 158 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm37172-201ENSMUST00000191926 615 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm43440-201ENSMUST00000201957 729 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm44088-201ENSMUST00000204595 237 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm45034-201ENSMUST00000206831 482 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 AC132104.1-201ENSMUST00000213615 260 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm23815-201ENSMUST00000083231 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm23520-201ENSMUST00000093736 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Mir466j-201ENSMUST00000116876 122 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm15148-201ENSMUST00000117602 156 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm14925-201ENSMUST00000120611 438 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm3835-201ENSMUST00000120752 403 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm14559-201ENSMUST00000121745 496 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm15885-201ENSMUST00000122114 388 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm24592-201ENSMUST00000122505 106 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm16563-201ENSMUST00000162673 423 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Adgrg4-206ENSMUST00000168724 531 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm17153-201ENSMUST00000171314 490 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm15143-201ENSMUST00000178180 714 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm5511-201ENSMUST00000189380 802 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm28924-201ENSMUST00000190012 241 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm24144-201ENSMUST00000082632 111 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm22444-201ENSMUST00000093693 108 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim40Q3UWA4 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms