Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm12261-201ENSMUST00000117499 645 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm14122-201ENSMUST00000122076 973 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm16250-201ENSMUST00000148974 256 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm23905-201ENSMUST00000157568 109 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm23499-201ENSMUST00000157736 268 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm22211-201ENSMUST00000158097 156 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Mir6960-201ENSMUST00000183449 61 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.41□□□□□ -1.7
Upf3bQ3ULL6 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Upf3bQ3ULL6 Gm23319-201ENSMUST00000104467 131 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm5060-201ENSMUST00000120072 599 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm16571-201ENSMUST00000159112 291 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Mir5134-201ENSMUST00000175529 78 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm5974-201ENSMUST00000181607 986 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Mir6996-201ENSMUST00000183922 61 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm37241-201ENSMUST00000191736 523 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm37501-201ENSMUST00000192830 691 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm43925-201ENSMUST00000203498 206 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm44817-201ENSMUST00000205416 453 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Upf3bQ3ULL6 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Snord65-201ENSMUST00000104269 72 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm24608-201ENSMUST00000104381 136 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm13902-201ENSMUST00000120168 605 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm43491-201ENSMUST00000197133 784 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm46369-201ENSMUST00000221577 401 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Upf3bQ3ULL6 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms