Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm12311-201ENSMUST00000118803 374 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm15807-201ENSMUST00000119880 1128 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm24175-201ENSMUST00000158931 129 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm22932-201ENSMUST00000175510 72 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm19898-201ENSMUST00000177490 251 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm27308-201ENSMUST00000184807 233 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm28288-201ENSMUST00000191019 214 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Mir691-201ENSMUST00000199719 78 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm45002-201ENSMUST00000208045 120 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm4987-201ENSMUST00000078326 408 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 n-R5s67-201ENSMUST00000104336 114 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm23705-201ENSMUST00000104370 130 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm12285-201ENSMUST00000117347 233 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm15783-201ENSMUST00000117521 633 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm16032-201ENSMUST00000118534 168 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm12482-201ENSMUST00000120435 630 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm14841-201ENSMUST00000121067 758 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm11849-201ENSMUST00000121293 261 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm25321-201ENSMUST00000122558 102 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm22235-201ENSMUST00000157085 110 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm22814-201ENSMUST00000157452 104 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm23669-201ENSMUST00000157470 128 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Zakit-201ENSMUST00000157677 308 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm20674-201ENSMUST00000177452 369 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm21827-201ENSMUST00000178247 423 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm29124-201ENSMUST00000186576 452 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm42623-201ENSMUST00000197225 379 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm18469-201ENSMUST00000208850 439 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm2059-201ENSMUST00000212025 287 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm44789-201ENSMUST00000207195 3101 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm15773-201ENSMUST00000118665 1448 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col9a1Q05722 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm8935-202ENSMUST00000105727 1959 ntBASIC6.57□□□□□ -1.36
Col9a1Q05722 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col9a1Q05722 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm43663-201ENSMUST00000198643 1505 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 AC155298.3-201ENSMUST00000225307 3220 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms