Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm15791-201ENSMUST00000120365 319 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm12110-201ENSMUST00000121601 579 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm15309-201ENSMUST00000121644 240 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm24438-201ENSMUST00000157893 115 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm25865-201ENSMUST00000158247 104 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm23855-201ENSMUST00000158377 135 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm26173-201ENSMUST00000158416 136 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm15974-201ENSMUST00000159103 531 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm18667-201ENSMUST00000186523 484 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm37272-201ENSMUST00000193401 488 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm37054-201ENSMUST00000193481 543 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm33973-201ENSMUST00000195148 534 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm42438-201ENSMUST00000197832 974 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm46996-201ENSMUST00000220924 408 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm24490-201ENSMUST00000083803 98 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 AW046200-203ENSMUST00000211787 2479 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Sox9Q04887 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox9Q04887 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Sox9Q04887 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Sox9Q04887 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm25876-201ENSMUST00000104329 119 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm14304-201ENSMUST00000117272 446 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm13614-201ENSMUST00000117306 503 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm14624-201ENSMUST00000117746 192 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm13311-201ENSMUST00000117863 379 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm11869-201ENSMUST00000118701 329 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm11761-201ENSMUST00000121392 445 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Sox9Q04887 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.54□□□□□ -1.52
Sox9Q04887 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox9Q04887 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm8151-201ENSMUST00000184817 871 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Gm29138-201ENSMUST00000191444 348 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm17951-201ENSMUST00000198536 496 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm43309-201ENSMUST00000200837 458 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.54□□□□□ -1.52
Sox9Q04887 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox9Q04887 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.54□□□□□ -1.52
Sox9Q04887 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox9Q04887 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sox9Q04887 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Sox9Q04887 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox9Q04887 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Sox9Q04887 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox9Q04887 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox9Q04887 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox9Q04887 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.53□□□□□ -1.52
Sox9Q04887 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox9Q04887 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Sox9Q04887 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox9Q04887 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox9Q04887 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Sox9Q04887 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms