Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm29552-201ENSMUST00000190548 660 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm37243-201ENSMUST00000193407 595 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm9173-201ENSMUST00000198054 400 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm5284-201ENSMUST00000199053 903 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm43892-201ENSMUST00000204373 265 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm20786-201ENSMUST00000212649 436 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 AC101677.1-201ENSMUST00000218590 158 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm4263-202ENSMUST00000221392 667 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 AC138667.2-201ENSMUST00000224880 598 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm9496-201ENSMUST00000191295 1601 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col6a1Q04857 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm24578-201ENSMUST00000103970 129 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm15113-201ENSMUST00000119280 836 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm23792-201ENSMUST00000122557 93 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm25970-201ENSMUST00000157165 86 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm24418-201ENSMUST00000177597 79 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm23568-201ENSMUST00000177960 92 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm24639-201ENSMUST00000178518 79 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm23076-201ENSMUST00000179082 79 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm25077-201ENSMUST00000179157 79 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm24829-201ENSMUST00000179245 92 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm25284-201ENSMUST00000180345 141 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm43467-201ENSMUST00000197441 437 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm44718-201ENSMUST00000206886 359 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm7948-201ENSMUST00000212607 844 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm18903-201ENSMUST00000215343 480 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 AC167140.1-201ENSMUST00000224710 403 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Olfr512-201ENSMUST00000074730 1056 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Mir17-201ENSMUST00000083574 84 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a1Q04857 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.16□□□□□ -1.42
Col6a1Q04857 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a1Q04857 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a1Q04857 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm15010-201ENSMUST00000117153 407 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm12016-201ENSMUST00000119079 681 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm13368-201ENSMUST00000122443 430 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm25389-201ENSMUST00000157340 286 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms