Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm37249-201ENSMUST00000195185 2869 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm38377-201ENSMUST00000193253 3772 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 AC154734.1-201ENSMUST00000219957 2141 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col8a1Q00780 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm22019-201ENSMUST00000104359 96 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm14909-201ENSMUST00000117853 351 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm12803-201ENSMUST00000118907 821 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm11352-201ENSMUST00000119264 517 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm22479-201ENSMUST00000122566 81 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Mir1903-201ENSMUST00000122574 80 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm24901-201ENSMUST00000158125 110 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm17511-201ENSMUST00000172206 342 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm20480-201ENSMUST00000173953 250 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm18667-201ENSMUST00000186523 484 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm28141-201ENSMUST00000186676 342 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC4.87□□□□□ -1.63
Col8a1Q00780 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm37243-201ENSMUST00000193407 595 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm4501-201ENSMUST00000207330 551 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm4558-201ENSMUST00000207886 521 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm4528-201ENSMUST00000207905 551 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm20786-201ENSMUST00000212649 436 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm20734-201ENSMUST00000216939 193 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 AC129219.1-201ENSMUST00000224336 448 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm38198-201ENSMUST00000191772 3581 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.87□□□□□ -1.63
Col8a1Q00780 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Col8a1Q00780 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col8a1Q00780 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm37926-201ENSMUST00000191922 2424 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm13770-201ENSMUST00000117149 305 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm15660-201ENSMUST00000118997 478 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm13338-201ENSMUST00000120235 361 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm12607-201ENSMUST00000120724 493 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm11805-201ENSMUST00000121238 600 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm11925-201ENSMUST00000121375 535 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm12755-201ENSMUST00000122297 282 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm24767-201ENSMUST00000158509 95 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm16290-201ENSMUST00000161175 474 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm24757-201ENSMUST00000176987 371 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Mir6975-201ENSMUST00000184879 61 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm28058-201ENSMUST00000186421 264 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm29148-201ENSMUST00000188140 336 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm28151-201ENSMUST00000189404 951 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm37418-201ENSMUST00000195031 274 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms