Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm26075-201ENSMUST00000104062 121 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Mir290a-201ENSMUST00000104627 83 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Mir105-201ENSMUST00000104655 80 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm13386-201ENSMUST00000117677 124 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm15553-201ENSMUST00000118757 430 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm13785-201ENSMUST00000119099 690 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm11625-201ENSMUST00000119535 296 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm15263-201ENSMUST00000121556 642 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm23499-201ENSMUST00000157736 268 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm23617-201ENSMUST00000175410 95 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm23816-201ENSMUST00000179617 132 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Mir6996-201ENSMUST00000183922 61 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm28267-201ENSMUST00000191093 265 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm43825-201ENSMUST00000199650 734 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm44431-201ENSMUST00000203500 413 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm8820-201ENSMUST00000204077 571 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Fus-202ENSMUST00000079045 2623 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm24281-201ENSMUST00000104234 136 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm8666-201ENSMUST00000117517 292 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm9435-201ENSMUST00000120379 877 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm25116-201ENSMUST00000157191 122 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm23098-201ENSMUST00000157552 299 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm35702-201ENSMUST00000198653 511 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm5995-201ENSMUST00000204107 1273 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm44583-201ENSMUST00000207478 281 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm44946-201ENSMUST00000208425 572 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm5176-201ENSMUST00000218244 1227 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm18507-201ENSMUST00000218855 525 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm29774-201ENSMUST00000219270 436 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Mir132-201ENSMUST00000083603 66 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nkx3-1P97436 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm12465-201ENSMUST00000118591 300 ntBASIC3.61□□□□□ -1.83
Nkx3-1P97436 Gm15364-201ENSMUST00000119618 585 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms