Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PrkdcP97313 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PrkdcP97313 Gm38067-201ENSMUST00000192346 1911 ntBASIC2.73□□□□□ -1.97
PrkdcP97313 Gm37789-201ENSMUST00000192862 2889 ntBASIC2.73□□□□□ -1.97
PrkdcP97313 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.73□□□□□ -1.97
PrkdcP97313 Gm23326-201ENSMUST00000157419 105 ntBASIC2.73□□□□□ -1.97
PrkdcP97313 Gm16545-201ENSMUST00000161968 463 ntBASIC2.73□□□□□ -1.97
PrkdcP97313 Gm28094-201ENSMUST00000185262 390 ntBASIC2.73□□□□□ -1.97
PrkdcP97313 Gm37617-201ENSMUST00000194309 159 ntBASIC2.73□□□□□ -1.97
PrkdcP97313 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PrkdcP97313 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PrkdcP97313 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC2.73□□□□□ -1.97
PrkdcP97313 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
PrkdcP97313 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 AC169985.1-201ENSMUST00000223648 2439 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
PrkdcP97313 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Gm12577-201ENSMUST00000119701 574 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.72□□□□□ -1.97
PrkdcP97313 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PrkdcP97313 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 Gm20693-201ENSMUST00000177431 211 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Gm27190-201ENSMUST00000184890 542 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PrkdcP97313 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Gm22908-201ENSMUST00000177620 110 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Gm37288-201ENSMUST00000193963 334 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Gm43424-201ENSMUST00000200484 253 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Snord7-201ENSMUST00000083781 97 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
PrkdcP97313 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
PrkdcP97313 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PrkdcP97313 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
PrkdcP97313 Gm43958-201ENSMUST00000204360 3544 ntBASIC2.72□□□□□ -1.97
PrkdcP97313 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PrkdcP97313 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PrkdcP97313 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
PrkdcP97313 Gm37562-201ENSMUST00000194763 4328 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PrkdcP97313 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
PrkdcP97313 Gm13803-201ENSMUST00000117547 489 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Gm11673-201ENSMUST00000117846 331 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Gm12268-201ENSMUST00000118398 442 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Gm15786-201ENSMUST00000121079 450 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.71□□□□□ -1.97
PrkdcP97313 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PrkdcP97313 Gm7258-201ENSMUST00000179317 300 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PrkdcP97313 Gm6841-201ENSMUST00000220602 598 ntBASIC2.71□□□□□ -1.97
PrkdcP97313 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC2.71□□□□□ -1.97
PrkdcP97313 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm37672-201ENSMUST00000192682 4014 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC2.71□□□□□ -1.98
PrkdcP97313 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm26146-201ENSMUST00000104478 185 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Mir1198-201ENSMUST00000116995 121 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm16021-201ENSMUST00000121176 219 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm11471-201ENSMUST00000121824 198 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm25846-201ENSMUST00000158013 135 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm18342-201ENSMUST00000186987 694 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 AC170999.2-201ENSMUST00000226223 264 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PrkdcP97313 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PrkdcP97313 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm37151-201ENSMUST00000194631 5007 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC2.71□□□□□ -1.98
PrkdcP97313 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PrkdcP97313 Gm37659-201ENSMUST00000194574 111 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm16419-201ENSMUST00000221057 625 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Gm272-201ENSMUST00000222073 919 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 AC173482.1-201ENSMUST00000224494 3815 ntBASIC2.71□□□□□ -1.98
PrkdcP97313 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms