Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm43718-201ENSMUST00000197524 1857 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm18180-201ENSMUST00000187562 1484 ntBASIC6.59□□□□□ -1.36
Rfx1P48377 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rfx1P48377 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rfx1P48377 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.59□□□□□ -1.36
Rfx1P48377 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Mir711-201ENSMUST00000102188 82 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rfx1P48377 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rfx1P48377 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rfx1P48377 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm14867-201ENSMUST00000120156 866 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm14831-201ENSMUST00000120253 409 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm14591-201ENSMUST00000120407 518 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm24383-201ENSMUST00000122691 333 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm23435-201ENSMUST00000157183 156 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm22491-201ENSMUST00000157190 102 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm25434-201ENSMUST00000158278 167 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm23583-201ENSMUST00000158533 289 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm23028-201ENSMUST00000158773 265 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm24179-201ENSMUST00000158925 127 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm21815-201ENSMUST00000178213 664 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm24306-201ENSMUST00000180229 79 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm28146-201ENSMUST00000185517 701 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm28574-201ENSMUST00000185757 699 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm28397-201ENSMUST00000187970 699 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm29366-201ENSMUST00000190481 699 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm28872-201ENSMUST00000191518 158 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm36954-201ENSMUST00000195362 363 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm9317-201ENSMUST00000197055 862 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm8041-201ENSMUST00000199755 616 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gm43762-201ENSMUST00000201521 295 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm45048-201ENSMUST00000207058 429 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 AC093926.1-201ENSMUST00000213730 243 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Gm10264-201ENSMUST00000220589 429 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 AC102291.2-201ENSMUST00000228083 367 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Rfx1P48377 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Rfx1P48377 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx1P48377 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.58□□□□□ -1.36
Rfx1P48377 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.58□□□□□ -1.36
Rfx1P48377 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rfx1P48377 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Pramel-201ENSMUST00000118979 1383 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm37639-201ENSMUST00000191623 2785 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm12281-201ENSMUST00000119536 298 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Clec2f-201ENSMUST00000121051 374 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm25807-201ENSMUST00000122783 305 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm16331-201ENSMUST00000144274 498 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms