Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxc11P31313 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm25096-201ENSMUST00000104043 129 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm23746-201ENSMUST00000104229 125 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm22020-201ENSMUST00000104358 136 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm11822-201ENSMUST00000119177 415 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm22514-201ENSMUST00000122547 308 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm23837-201ENSMUST00000122656 286 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm24628-201ENSMUST00000122761 289 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm3362-201ENSMUST00000148102 466 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm26349-201ENSMUST00000157530 130 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm22804-201ENSMUST00000158052 101 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm25655-201ENSMUST00000158465 290 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxc11P31313 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm6113-201ENSMUST00000180319 639 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm29668-201ENSMUST00000187802 315 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm28625-201ENSMUST00000188309 205 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm20056-201ENSMUST00000194813 519 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm5842-201ENSMUST00000195073 622 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm43309-201ENSMUST00000200837 458 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm18011-201ENSMUST00000203717 565 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm45382-201ENSMUST00000210607 151 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hoxc11P31313 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm7034-201ENSMUST00000218638 645 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm8158-201ENSMUST00000219220 465 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Gm8112-201ENSMUST00000219637 465 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxc11P31313 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxc11P31313 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxc11P31313 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.78□□□□□ -1.64
Hoxc11P31313 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxc11P31313 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm25419-201ENSMUST00000104215 191 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Mir879-201ENSMUST00000104703 76 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm11486-201ENSMUST00000107322 478 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm11742-201ENSMUST00000119903 233 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm5353-201ENSMUST00000139800 793 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm23171-201ENSMUST00000157159 264 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm23499-201ENSMUST00000157736 268 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm23034-201ENSMUST00000158001 147 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm24217-201ENSMUST00000158260 133 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm8161-201ENSMUST00000168739 481 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm28957-201ENSMUST00000190174 373 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm3690-201ENSMUST00000211341 262 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Gm40598-201ENSMUST00000222953 547 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.77□□□□□ -1.65
Hoxc11P31313 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Hoxc11P31313 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Hoxc11P31313 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms