Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col2a1P28481 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col2a1P28481 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col2a1P28481 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col2a1P28481 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col2a1P28481 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col2a1P28481 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col2a1P28481 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col2a1P28481 Gm24987-201ENSMUST00000104453 134 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm24067-201ENSMUST00000104514 85 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm15994-201ENSMUST00000118029 402 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col2a1P28481 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.55□□□□□ -1.68
Col2a1P28481 Gm23121-201ENSMUST00000157653 173 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm22531-201ENSMUST00000158819 140 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm6625-201ENSMUST00000177870 272 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Col2a1P28481 Gm29563-201ENSMUST00000187249 496 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm18487-201ENSMUST00000215826 878 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.55□□□□□ -1.68
Col2a1P28481 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Gm23518-201ENSMUST00000082835 153 ntBASIC4.55□□□□□ -1.68
Col2a1P28481 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.54□□□□□ -1.68
Col2a1P28481 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm12931-201ENSMUST00000117046 324 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm11566-201ENSMUST00000118550 203 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm14714-201ENSMUST00000119743 439 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm13677-201ENSMUST00000120739 595 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm22311-201ENSMUST00000158006 110 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm26746-201ENSMUST00000181722 487 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm19243-201ENSMUST00000198592 269 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 AC153936.1-201ENSMUST00000219874 395 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm24626-201ENSMUST00000082621 161 ntBASIC4.54□□□□□ -1.68
Col2a1P28481 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Col2a1P28481 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Col2a1P28481 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col2a1P28481 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Col2a1P28481 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col2a1P28481 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col2a1P28481 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col2a1P28481 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.53□□□□□ -1.68
Col2a1P28481 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Col2a1P28481 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col2a1P28481 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col2a1P28481 Gm15783-201ENSMUST00000117521 633 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm12458-201ENSMUST00000119387 495 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm15014-201ENSMUST00000120742 258 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm22889-201ENSMUST00000158639 58 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col2a1P28481 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.53□□□□□ -1.68
Col2a1P28481 Gm6240-201ENSMUST00000208014 473 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.53□□□□□ -1.68
Col2a1P28481 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.53□□□□□ -1.68
Col2a1P28481 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col2a1P28481 Olfr713-201ENSMUST00000098139 975 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Gm10704-201ENSMUST00000098952 730 ntBASIC4.53□□□□□ -1.68
Col2a1P28481 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Col2a1P28481 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col2a1P28481 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Col2a1P28481 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.53□□□□□ -1.68
Col2a1P28481 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Col2a1P28481 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Col2a1P28481 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
Col2a1P28481 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col2a1P28481 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col2a1P28481 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms