Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm32526-201ENSMUST00000221878 981 ntBASIC6.15□□□□□ -1.42
RaraP11416 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RaraP11416 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RaraP11416 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RaraP11416 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RaraP11416 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RaraP11416 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.15□□□□□ -1.43
RaraP11416 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RaraP11416 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC6.15□□□□□ -1.43
RaraP11416 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RaraP11416 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RaraP11416 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC6.15□□□□□ -1.43
RaraP11416 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
RaraP11416 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Gm37096-201ENSMUST00000192317 2058 ntBASIC6.14□□□□□ -1.43
RaraP11416 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
RaraP11416 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
RaraP11416 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.14□□□□□ -1.43
RaraP11416 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RaraP11416 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Gm11408-201ENSMUST00000117889 519 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm16423-201ENSMUST00000120078 947 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm12876-201ENSMUST00000120975 408 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm15618-201ENSMUST00000121610 452 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.14□□□□□ -1.43
RaraP11416 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.14□□□□□ -1.43
RaraP11416 Gm22563-201ENSMUST00000157333 269 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm25334-201ENSMUST00000158036 110 ntBASIC6.14□□□□□ -1.43
RaraP11416 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.14□□□□□ -1.43
RaraP11416 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm17916-202ENSMUST00000187634 1187 ntBASIC6.14□□□□□ -1.43
RaraP11416 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Gm5734-201ENSMUST00000189787 913 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.14□□□□□ -1.43
RaraP11416 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.14□□□□□ -1.43
RaraP11416 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Gm44611-201ENSMUST00000207507 355 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm19196-201ENSMUST00000209258 357 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Gm45588-201ENSMUST00000211213 630 ntBASIC6.14□□□□□ -1.43
RaraP11416 AC166358.10-201ENSMUST00000220556 144 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm7042-201ENSMUST00000223027 384 ntBASIC6.14□□□□□ -1.43
RaraP11416 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.14□□□□□ -1.43
RaraP11416 AC117588.2-201ENSMUST00000228340 311 ntBASIC6.14□□□□□ -1.43
RaraP11416 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RaraP11416 Gm24037-201ENSMUST00000082871 180 ntBASIC6.14□□□□□ -1.43
RaraP11416 Snord38a-201ENSMUST00000083746 71 ntBASIC6.14□□□□□ -1.43
RaraP11416 Gm23795-201ENSMUST00000084006 137 ntBASIC6.14□□□□□ -1.43
RaraP11416 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RaraP11416 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.14□□□□□ -1.43
RaraP11416 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RaraP11416 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
RaraP11416 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
RaraP11416 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
RaraP11416 AC154184.1-201ENSMUST00000224375 1620 ntBASIC6.14□□□□□ -1.43
RaraP11416 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RaraP11416 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Gm23440-201ENSMUST00000104299 130 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 Gm11784-201ENSMUST00000118568 474 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm14821-201ENSMUST00000121975 435 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm15300-201ENSMUST00000122324 279 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RaraP11416 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 Gm26346-201ENSMUST00000157525 329 ntBASIC6.13□□□□□ -1.43
RaraP11416 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.13□□□□□ -1.43
RaraP11416 Mir5110-201ENSMUST00000175537 87 ntBASIC6.13□□□□□ -1.43
RaraP11416 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RaraP11416 Gm27660-201ENSMUST00000184028 208 ntBASIC6.13□□□□□ -1.43
RaraP11416 Gm37336-202ENSMUST00000193705 468 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms