Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxa9P09631 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm24788-201ENSMUST00000104283 156 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Mir105-201ENSMUST00000104655 80 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm6969-201ENSMUST00000140065 342 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm23229-201ENSMUST00000157297 105 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm25456-201ENSMUST00000157952 109 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29320-201ENSMUST00000185235 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm28471-201ENSMUST00000185994 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29179-202ENSMUST00000186138 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm28598-201ENSMUST00000186490 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29448-201ENSMUST00000186675 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29314-201ENSMUST00000186800 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm28253-202ENSMUST00000187971 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm3496-201ENSMUST00000188283 745 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29268-201ENSMUST00000188669 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29169-201ENSMUST00000189835 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29428-201ENSMUST00000190086 409 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm29218-205ENSMUST00000190846 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm28978-201ENSMUST00000191120 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm37172-201ENSMUST00000191926 615 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm8790-201ENSMUST00000194108 322 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm37601-201ENSMUST00000194922 394 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm43559-201ENSMUST00000198755 466 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm43895-201ENSMUST00000203219 855 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm46996-201ENSMUST00000220924 408 ntBASIC4.34□□□□□ -1.71
Hoxa9P09631 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
Hoxa9P09631 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxa9P09631 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Hoxa9P09631 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxa9P09631 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxa9P09631 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxa9P09631 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm23424-201ENSMUST00000103889 110 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm14365-201ENSMUST00000117535 587 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm14103-201ENSMUST00000119075 366 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm12252-201ENSMUST00000119517 219 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm6373-201ENSMUST00000121026 360 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm9003-201ENSMUST00000121810 482 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm25292-201ENSMUST00000122797 322 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm5924-201ENSMUST00000132554 871 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm23228-201ENSMUST00000157296 270 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm25908-201ENSMUST00000157624 98 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm25224-201ENSMUST00000158195 68 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.33□□□□□ -1.72
Hoxa9P09631 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm44871-201ENSMUST00000207821 497 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.33□□□□□ -1.72
Hoxa9P09631 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Hoxa9P09631 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.33□□□□□ -1.72
Hoxa9P09631 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxa9P09631 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.32□□□□□ -1.72
Hoxa9P09631 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm11673-201ENSMUST00000117846 331 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm13687-201ENSMUST00000119857 282 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm13973-201ENSMUST00000121371 894 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm22588-201ENSMUST00000157510 140 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm22968-201ENSMUST00000157955 118 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm6650-201ENSMUST00000166710 614 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm5473-201ENSMUST00000179326 642 ntBASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.32□□□□□ -1.72
Hoxa9P09631 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms