Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm26148-201ENSMUST00000157430 68 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm27033-201ENSMUST00000183226 544 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm8296-201ENSMUST00000185597 524 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm45226-201ENSMUST00000206602 288 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm44681-201ENSMUST00000208447 842 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 AC147628.1-201ENSMUST00000228193 688 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col3a1P08121 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col3a1P08121 Mir193a-201ENSMUST00000083461 66 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col3a1P08121 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm13321-201ENSMUST00000117101 400 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm11692-201ENSMUST00000122121 902 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm22059-201ENSMUST00000157544 104 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm24505-201ENSMUST00000157682 126 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm17075-201ENSMUST00000171924 670 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col3a1P08121 Gm5974-201ENSMUST00000181607 986 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC5.01□□□□□ -1.61
Col3a1P08121 Gm29598-201ENSMUST00000188996 588 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC5.01□□□□□ -1.61
Col3a1P08121 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.01□□□□□ -1.61
Col3a1P08121 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm29774-201ENSMUST00000219270 436 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 AV026068-237ENSMUST00000226075 572 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col3a1P08121 Gm7381-201ENSMUST00000098958 300 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Gm37211-201ENSMUST00000193392 3433 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col3a1P08121 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col3a1P08121 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col3a1P08121 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col3a1P08121 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.01□□□□□ -1.61
Col3a1P08121 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col3a1P08121 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Col3a1P08121 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Col3a1P08121 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Col3a1P08121 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col3a1P08121 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.01□□□□□ -1.61
Col3a1P08121 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col3a1P08121 Gm15014-201ENSMUST00000120742 258 ntBASIC5□□□□□ -1.61
Col3a1P08121 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC5□□□□□ -1.61
Col3a1P08121 Gm24534-201ENSMUST00000157949 291 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm29640-201ENSMUST00000187972 278 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5□□□□□ -1.61
Col3a1P08121 Gm8132-201ENSMUST00000204938 640 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5□□□□□ -1.61
Col3a1P08121 Gm44849-201ENSMUST00000207595 484 ntBASIC5□□□□□ -1.61
Col3a1P08121 CT025526.1-201ENSMUST00000217327 267 ntBASIC5□□□□□ -1.61
Col3a1P08121 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5□□□□□ -1.61
Col3a1P08121 Gm23302-201ENSMUST00000082710 100 ntBASIC5□□□□□ -1.61
Col3a1P08121 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Col3a1P08121 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm42680-201ENSMUST00000196238 2500 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm43317-201ENSMUST00000197924 2544 ntBASIC5□□□□□ -1.61
Col3a1P08121 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col3a1P08121 Gm42520-201ENSMUST00000199642 1502 ntBASIC5□□□□□ -1.61
Col3a1P08121 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col3a1P08121 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Col3a1P08121 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col3a1P08121 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col3a1P08121 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col3a1P08121 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5□□□□□ -1.61
Col3a1P08121 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col3a1P08121 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col3a1P08121 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col3a1P08121 Gm13478-201ENSMUST00000118312 413 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm15141-201ENSMUST00000121860 729 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm15885-201ENSMUST00000122114 388 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm25572-201ENSMUST00000157527 172 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5□□□□□ -1.61
Col3a1P08121 Gm22398-201ENSMUST00000174941 125 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm22857-201ENSMUST00000174969 134 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm25731-201ENSMUST00000175167 125 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm19503-201ENSMUST00000187109 241 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm37866-201ENSMUST00000191950 696 ntBASIC5□□□□□ -1.61
Col3a1P08121 Gm42451-201ENSMUST00000197410 244 ntBASIC5□□□□□ -1.61
Col3a1P08121 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5□□□□□ -1.61
Col3a1P08121 Gm8703-201ENSMUST00000203793 730 ntBASIC5□□□□□ -1.61
Col3a1P08121 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5□□□□□ -1.61
Col3a1P08121 Gm7034-201ENSMUST00000218638 645 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 170 ms