Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Cbx4O55187 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm11781-201ENSMUST00000118328 472 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm14898-201ENSMUST00000120202 645 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm8051-201ENSMUST00000120464 466 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.61□□□□□ -1.67
Cbx4O55187 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm26310-201ENSMUST00000157766 117 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Mir3058-201ENSMUST00000175126 91 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm20674-201ENSMUST00000177452 369 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm26828-201ENSMUST00000180640 172 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm26993-201ENSMUST00000182766 789 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm27522-201ENSMUST00000183949 230 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm18117-201ENSMUST00000187720 742 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm36974-201ENSMUST00000194200 1071 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm43659-201ENSMUST00000200894 628 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm42458-201ENSMUST00000201914 369 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm44727-201ENSMUST00000204225 451 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm36247-201ENSMUST00000211834 285 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 AC154636.3-201ENSMUST00000221489 1214 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 AC150560.3-201ENSMUST00000227442 455 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cbx4O55187 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cbx4O55187 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cbx4O55187 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.61□□□□□ -1.67
Cbx4O55187 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cbx4O55187 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Cbx4O55187 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cbx4O55187 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Cbx4O55187 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm24117-201ENSMUST00000103973 133 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm12285-201ENSMUST00000117347 233 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm15297-201ENSMUST00000117795 290 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm16128-201ENSMUST00000117855 626 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm16179-201ENSMUST00000120685 373 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm15488-201ENSMUST00000121682 670 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm11344-201ENSMUST00000122011 335 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm22958-201ENSMUST00000122512 184 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm16060-201ENSMUST00000153140 478 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm26098-201ENSMUST00000157247 288 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm25185-201ENSMUST00000157754 96 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm22383-201ENSMUST00000158188 327 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm20657-201ENSMUST00000177079 515 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm4557-201ENSMUST00000185826 907 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm4526-201ENSMUST00000186039 920 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm8708-201ENSMUST00000188500 906 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm42643-201ENSMUST00000200504 279 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm2522-201ENSMUST00000204280 322 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.6□□□□□ -1.67
Cbx4O55187 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.6□□□□□ -1.67
Cbx4O55187 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cbx4O55187 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.6□□□□□ -1.67
Cbx4O55187 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms