Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm12173-201ENSMUST00000117622 273 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm12884-201ENSMUST00000120371 325 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Clec2f-201ENSMUST00000121051 374 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm6245-201ENSMUST00000164699 768 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm38270-201ENSMUST00000192721 407 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm5338-201ENSMUST00000209530 639 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm7093-201ENSMUST00000223004 581 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.91□□□□□ -1.78
Cx3cl1O35188 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cx3cl1O35188 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cx3cl1O35188 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.9□□□□□ -1.78
Cx3cl1O35188 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Cx3cl1O35188 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.9□□□□□ -1.78
Cx3cl1O35188 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm11432-201ENSMUST00000117334 231 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm14714-201ENSMUST00000119743 439 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm25965-201ENSMUST00000157170 93 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm23905-201ENSMUST00000157568 109 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm22314-201ENSMUST00000158007 281 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Mir5106-201ENSMUST00000174936 73 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm8221-201ENSMUST00000178052 564 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm23215-201ENSMUST00000178153 121 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Mir7074-201ENSMUST00000183884 63 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm27254-201ENSMUST00000183926 517 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Ighv10-4-201ENSMUST00000193702 299 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm43855-201ENSMUST00000197462 507 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm35702-201ENSMUST00000198653 511 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm43028-201ENSMUST00000202561 481 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm44521-201ENSMUST00000206469 217 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm19366-201ENSMUST00000206996 156 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.9□□□□□ -1.79
Cx3cl1O35188 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.9□□□□□ -1.79
Cx3cl1O35188 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm24125-201ENSMUST00000104105 137 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm24608-201ENSMUST00000104381 136 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm12638-201ENSMUST00000119531 298 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm14649-201ENSMUST00000121814 324 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm22135-201ENSMUST00000158752 108 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Mir6414-201ENSMUST00000183685 82 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm36259-201ENSMUST00000197340 392 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm43730-201ENSMUST00000199863 372 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm9245-201ENSMUST00000200528 983 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm19908-201ENSMUST00000204684 391 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm17780-201ENSMUST00000207142 612 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cx3cl1O35188 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.89□□□□□ -1.79
Cx3cl1O35188 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms