Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm24789-201ENSMUST00000104282 131 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm14995-201ENSMUST00000117135 391 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm15176-201ENSMUST00000117734 135 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm13245-201ENSMUST00000119646 260 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm13132-201ENSMUST00000121194 472 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm11677-201ENSMUST00000121349 977 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm12706-201ENSMUST00000121588 698 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm22106-201ENSMUST00000122544 127 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm22478-201ENSMUST00000122570 154 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm22383-201ENSMUST00000158188 327 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm24664-201ENSMUST00000158939 100 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Mir3572-201ENSMUST00000175549 86 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm28560-201ENSMUST00000186091 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm28334-201ENSMUST00000186653 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm28495-201ENSMUST00000188452 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm28232-201ENSMUST00000188683 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm28481-201ENSMUST00000189231 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm28211-201ENSMUST00000190920 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm29059-201ENSMUST00000191534 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm37765-201ENSMUST00000192395 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm37237-201ENSMUST00000192893 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm37421-201ENSMUST00000193088 132 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm36968-201ENSMUST00000193737 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm5842-201ENSMUST00000195073 622 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm38290-201ENSMUST00000195238 315 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm18414-201ENSMUST00000210858 694 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm24254-201ENSMUST00000083702 104 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.4□□□□□ -1.71
Shisa8J3QNX5 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm12760-201ENSMUST00000117861 482 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm11845-201ENSMUST00000117886 327 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm14991-201ENSMUST00000119913 598 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm8061-201ENSMUST00000122380 350 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm11197-201ENSMUST00000145158 839 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm24931-201ENSMUST00000158324 107 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Mir7008-201ENSMUST00000184398 63 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Mir7j-201ENSMUST00000184427 122 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm29484-201ENSMUST00000186067 324 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm37219-201ENSMUST00000192036 926 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm37070-201ENSMUST00000193272 460 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm18340-201ENSMUST00000196342 609 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm43276-201ENSMUST00000199712 364 ntBASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Shisa8J3QNX5 Gm43884-201ENSMUST00000204251 559 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms