Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm25213-201ENSMUST00000102388 113 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm11774-201ENSMUST00000118601 293 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm14933-201ENSMUST00000118840 481 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm14362-201ENSMUST00000121679 273 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm15254-201ENSMUST00000149567 273 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm26170-201ENSMUST00000158419 148 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm23149-201ENSMUST00000158837 230 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm43033-201ENSMUST00000199682 425 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm6520-201ENSMUST00000200636 410 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm19761-201ENSMUST00000205372 391 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm4587-201ENSMUST00000209135 637 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm7990-201ENSMUST00000212126 593 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 AC154296.2-201ENSMUST00000214696 545 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm8288-201ENSMUST00000223406 593 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm4963-201ENSMUST00000072718 378 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Pcdh1F7BJK1 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Snord116l9-201ENSMUST00000101891 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26504-201ENSMUST00000102033 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Mir292-201ENSMUST00000104847 82 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm13114-201ENSMUST00000117605 106 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm7429-201ENSMUST00000118664 348 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm13866-201ENSMUST00000118901 968 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm16423-201ENSMUST00000120078 947 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm12515-201ENSMUST00000120116 361 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm25227-201ENSMUST00000158204 112 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm9071-201ENSMUST00000165915 474 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm22258-201ENSMUST00000177645 94 ntBASIC5.05□□□□□ -1.6
Pcdh1F7BJK1 Gm26502-201ENSMUST00000177732 94 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms