Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm22267-201ENSMUST00000104008 131 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm24989-201ENSMUST00000104461 88 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm11976-201ENSMUST00000119236 295 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm14115-201ENSMUST00000119242 482 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm16016-201ENSMUST00000120831 550 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm15168-201ENSMUST00000121057 316 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm12101-201ENSMUST00000121590 390 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm12833-201ENSMUST00000136112 477 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm25487-201ENSMUST00000158725 125 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm3242-201ENSMUST00000171273 485 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm22642-201ENSMUST00000175352 252 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm25194-201ENSMUST00000177987 79 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm22307-201ENSMUST00000180019 107 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm23406-201ENSMUST00000082537 122 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm12646-201ENSMUST00000119144 238 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm17511-201ENSMUST00000172206 342 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm26746-201ENSMUST00000181722 487 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm27853-201ENSMUST00000184176 250 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm29228-201ENSMUST00000185489 418 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm29650-201ENSMUST00000188485 742 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm37272-201ENSMUST00000193401 488 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm43601-201ENSMUST00000196294 945 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm22897-201ENSMUST00000197860 128 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm44307-201ENSMUST00000204466 764 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm44279-201ENSMUST00000205154 472 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm45156-201ENSMUST00000207255 439 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm7351-201ENSMUST00000210745 580 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm45735-201ENSMUST00000212779 319 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.73□□□□□ -1.49
Trim39Q9ESN2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms