Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm23925-202ENSMUST00000188429 132 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm36964-201ENSMUST00000191876 198 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm42526-201ENSMUST00000198956 393 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 AC121804.1-201ENSMUST00000221016 394 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm23875-201ENSMUST00000083711 318 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.7□□□□□ -1.82
Hmgn3Q9DCB1 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm15766-201ENSMUST00000118025 813 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm13808-201ENSMUST00000121353 184 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm24239-201ENSMUST00000157791 255 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm24224-201ENSMUST00000158828 258 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm3091-201ENSMUST00000163408 484 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm20397-201ENSMUST00000174520 362 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Gm44220-201ENSMUST00000203784 2487 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgn3Q9DCB1 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm15364-201ENSMUST00000119618 585 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm11830-201ENSMUST00000120175 561 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm13118-201ENSMUST00000120402 549 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm22536-201ENSMUST00000158171 134 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm25264-201ENSMUST00000158519 117 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm16589-201ENSMUST00000159522 918 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm3077-201ENSMUST00000165903 627 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Mir7020-201ENSMUST00000183787 70 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm27387-201ENSMUST00000184583 116 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm28859-201ENSMUST00000186650 616 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm38046-201ENSMUST00000192733 550 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm4644-201ENSMUST00000197587 400 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm8035-201ENSMUST00000204625 687 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm7807-201ENSMUST00000212475 578 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Gm31931-201ENSMUST00000219666 222 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Ap3m1-208ENSMUST00000224016 764 ntBASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hmgn3Q9DCB1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Gm23424-201ENSMUST00000103889 110 ntBASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Gm15333-201ENSMUST00000118825 364 ntBASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Gm13677-201ENSMUST00000120739 595 ntBASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgn3Q9DCB1 Gm24014-201ENSMUST00000157728 157 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms