Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm24429-201ENSMUST00000104076 132 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm24789-201ENSMUST00000104282 131 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm15854-201ENSMUST00000118879 808 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm14238-201ENSMUST00000120227 323 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm5384-201ENSMUST00000120313 463 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm23993-201ENSMUST00000157478 144 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm25459-201ENSMUST00000157953 114 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm25865-201ENSMUST00000158247 104 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm22518-201ENSMUST00000158267 68 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm2855-201ENSMUST00000166765 456 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Trbv10-201ENSMUST00000168322 289 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm8807-201ENSMUST00000179328 492 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm6055-201ENSMUST00000180532 378 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm27036-201ENSMUST00000182465 980 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm28974-201ENSMUST00000187893 231 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm29107-201ENSMUST00000190910 347 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm20819-201ENSMUST00000191091 925 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm37501-201ENSMUST00000192830 691 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm37882-201ENSMUST00000195254 196 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm19253-201ENSMUST00000204279 307 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm19936-201ENSMUST00000216414 838 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC192616.3-201ENSMUST00000220797 1124 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC154636.3-201ENSMUST00000221489 1214 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm2544-201ENSMUST00000222702 756 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC122858.1-201ENSMUST00000226212 433 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC122858.3-201ENSMUST00000226341 740 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm5045-201ENSMUST00000027054 810 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm10064-201ENSMUST00000071235 399 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm22684-201ENSMUST00000082849 132 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Mir331-201ENSMUST00000083673 96 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.73□□□□□ -1.65
Sf3a3Q9D554 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm25097-201ENSMUST00000104042 145 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm22374-201ENSMUST00000104583 132 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm11898-201ENSMUST00000117161 385 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm13640-201ENSMUST00000118445 264 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm12096-201ENSMUST00000121149 829 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm13489-201ENSMUST00000121234 971 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm14977-201ENSMUST00000121626 812 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm16363-201ENSMUST00000132460 877 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm12833-201ENSMUST00000136112 477 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm26347-201ENSMUST00000157526 131 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm26172-201ENSMUST00000158421 134 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm26401-201ENSMUST00000158502 76 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm7609-204ENSMUST00000161424 461 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm17085-201ENSMUST00000165425 502 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm17154-201ENSMUST00000165748 431 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.72□□□□□ -1.65
Sf3a3Q9D554 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms