Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm13131-201ENSMUST00000122228 321 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm26254-201ENSMUST00000122491 118 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm3496-201ENSMUST00000188283 745 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm38150-201ENSMUST00000192996 452 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm8599-201ENSMUST00000193033 457 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm7897-201ENSMUST00000193981 554 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm42720-201ENSMUST00000196813 300 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm21006-201ENSMUST00000196930 667 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm43144-201ENSMUST00000198256 485 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm42990-201ENSMUST00000199231 312 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm42458-201ENSMUST00000201914 369 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm45007-201ENSMUST00000206237 366 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm44615-201ENSMUST00000206548 358 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm6171-201ENSMUST00000220760 645 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm24031-201ENSMUST00000083930 131 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm15159-201ENSMUST00000117062 764 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm12112-201ENSMUST00000117772 231 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm12237-201ENSMUST00000120158 470 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm16100-201ENSMUST00000120489 231 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm14907-201ENSMUST00000121948 854 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm7855-201ENSMUST00000137737 687 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm42643-201ENSMUST00000200504 279 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm42474-201ENSMUST00000201073 505 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm43596-201ENSMUST00000202818 884 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm44259-201ENSMUST00000204996 298 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps28Q9D1C8 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.77□□□□□ -1.65
Vps28Q9D1C8 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms