Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm5842-201ENSMUST00000195073 622 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm8319-201ENSMUST00000205708 641 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Msh4Q99MT2 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.75□□□□□ -1.65
Msh4Q99MT2 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Msh4Q99MT2 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm11790-201ENSMUST00000119569 455 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm14977-201ENSMUST00000121626 812 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm24962-201ENSMUST00000157917 109 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm27036-201ENSMUST00000182465 980 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm28769-201ENSMUST00000190176 615 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm8681-201ENSMUST00000219115 618 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm7040-201ENSMUST00000223271 443 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm22864-201ENSMUST00000083950 130 ntBASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Msh4Q99MT2 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm24578-201ENSMUST00000103970 129 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm11346-201ENSMUST00000118346 704 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm11325-201ENSMUST00000119967 469 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm14534-201ENSMUST00000120045 357 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm14905-201ENSMUST00000122351 639 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm12854-201ENSMUST00000128518 297 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm6182-201ENSMUST00000156439 1208 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm26153-201ENSMUST00000157433 127 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm26349-201ENSMUST00000157530 130 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm25603-201ENSMUST00000158361 105 ntBASIC4.73□□□□□ -1.65
Msh4Q99MT2 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Msh4Q99MT2 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 212.5 ms