Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Smc5-206ENSMUST00000226111 3265 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm14575-201ENSMUST00000117210 560 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm6134-201ENSMUST00000117265 171 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Zfp389-201ENSMUST00000118425 675 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm12281-201ENSMUST00000119536 298 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm11197-201ENSMUST00000145158 839 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm16259-201ENSMUST00000145241 553 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Cfap61-214ENSMUST00000167179 183 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm27409-201ENSMUST00000184727 80 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Mir496b-201ENSMUST00000184935 113 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm29105-201ENSMUST00000187256 450 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm29284-201ENSMUST00000188363 255 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm38234-201ENSMUST00000195204 421 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm37119-201ENSMUST00000195691 389 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm43035-201ENSMUST00000197626 517 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm43114-201ENSMUST00000198298 343 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm44277-201ENSMUST00000205128 649 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm45530-201ENSMUST00000211658 225 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm3800-201ENSMUST00000221086 554 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.04□□□□□ -1.6
Clrn1Q8K445 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm14750-201ENSMUST00000118262 516 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm14835-201ENSMUST00000119039 315 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm26086-201ENSMUST00000157902 263 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm8161-201ENSMUST00000168739 481 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm25451-201ENSMUST00000177832 121 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Mir6951-201ENSMUST00000183910 75 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms