Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mir6993-201ENSMUST00000184912 65 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm37300-201ENSMUST00000193327 280 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm45420-201ENSMUST00000211243 425 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm3829-201ENSMUST00000222362 619 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm37244-201ENSMUST00000191748 1981 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Gm11403-201ENSMUST00000122195 369 ntBASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Gm24739-201ENSMUST00000158855 292 ntBASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Gm17887-201ENSMUST00000200194 547 ntBASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Gm8132-201ENSMUST00000204938 640 ntBASIC3.59□□□□□ -1.84
Col6a6Q8C6K9 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Mir1934-201ENSMUST00000158127 83 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm4540-201ENSMUST00000170669 429 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm20399-201ENSMUST00000174652 132 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm36998-201ENSMUST00000193205 704 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm5185-201ENSMUST00000080271 619 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm43606-201ENSMUST00000195938 3556 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Mir6385-201ENSMUST00000184295 105 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a6Q8C6K9 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm38101-201ENSMUST00000193484 3557 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm46199-201ENSMUST00000220373 1693 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm11971-201ENSMUST00000117715 288 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm43774-201ENSMUST00000196327 878 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm4644-201ENSMUST00000197587 400 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm42926-201ENSMUST00000200496 697 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm19073-201ENSMUST00000219978 555 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Col6a6Q8C6K9 Gm43282-201ENSMUST00000201848 2157 ntBASIC3.56□□□□□ -1.84
Col6a6Q8C6K9 Gm22115-201ENSMUST00000103976 133 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms