Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm6673-201ENSMUST00000166114 700 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm20401-201ENSMUST00000173717 212 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm20480-201ENSMUST00000173953 250 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm22932-201ENSMUST00000175510 72 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Mir5624-201ENSMUST00000176635 61 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm23793-201ENSMUST00000179396 117 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm23648-201ENSMUST00000180301 107 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm27849-201ENSMUST00000183673 125 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm44494-201ENSMUST00000196760 129 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm45048-201ENSMUST00000207058 429 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm18194-201ENSMUST00000210455 481 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm18413-201ENSMUST00000221573 655 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm19195-201ENSMUST00000222018 511 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm23506-201ENSMUST00000083077 107 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Olfr713-201ENSMUST00000098139 975 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 AC124446.1-201ENSMUST00000221027 2644 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trim47Q8C0E3 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm25213-201ENSMUST00000102388 113 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Mir450-2-201ENSMUST00000102444 69 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm13770-201ENSMUST00000117149 305 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 n-R5s87-201ENSMUST00000122752 116 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm9317-201ENSMUST00000197055 862 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 AC155167.1-201ENSMUST00000228931 614 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Clec2j-201ENSMUST00000032517 515 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm23515-201ENSMUST00000082829 107 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Gm43718-201ENSMUST00000197524 1857 ntBASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim47Q8C0E3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm7421-201ENSMUST00000119298 639 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm8430-201ENSMUST00000119780 471 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm14534-201ENSMUST00000120045 357 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm7365-201ENSMUST00000120877 639 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm22940-201ENSMUST00000158560 155 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm17062-201ENSMUST00000166987 461 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm21959-201ENSMUST00000178439 452 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm21809-201ENSMUST00000178495 468 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms