Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm25096-201ENSMUST00000104043 129 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm15076-201ENSMUST00000117076 474 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm4596-201ENSMUST00000117197 442 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm16128-201ENSMUST00000117855 626 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm11366-201ENSMUST00000119279 429 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm16179-201ENSMUST00000120685 373 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm25318-201ENSMUST00000122554 314 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm27036-201ENSMUST00000182465 980 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm27342-201ENSMUST00000183530 109 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Mir8118-201ENSMUST00000183962 129 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Mir6986-201ENSMUST00000184483 58 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm29524-201ENSMUST00000190819 699 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm37492-201ENSMUST00000191948 376 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm2147-201ENSMUST00000193588 639 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm43245-201ENSMUST00000197603 468 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm29781-201ENSMUST00000203862 478 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm25509-201ENSMUST00000116985 106 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm14995-201ENSMUST00000117135 391 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm13087-201ENSMUST00000118298 256 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm14933-201ENSMUST00000118840 481 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm14927-201ENSMUST00000120283 454 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm22343-201ENSMUST00000122648 286 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm28385-201ENSMUST00000185671 292 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm29563-201ENSMUST00000187249 496 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm18177-201ENSMUST00000188373 404 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm36966-201ENSMUST00000192217 413 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm38011-201ENSMUST00000193312 279 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm43582-201ENSMUST00000196149 343 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm43794-201ENSMUST00000200971 692 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm44050-201ENSMUST00000204263 527 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm44212-201ENSMUST00000205016 897 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm44648-201ENSMUST00000208267 329 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm18645-201ENSMUST00000209593 651 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 AC153526.1-201ENSMUST00000219750 190 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms