Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm9587-201ENSMUST00000172449 454 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm29576-201ENSMUST00000188020 678 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm28354-201ENSMUST00000190904 678 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm37243-201ENSMUST00000193407 595 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm36985-201ENSMUST00000195595 379 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm44212-201ENSMUST00000205016 897 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 AC164297.5-201ENSMUST00000224365 198 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.61□□□□□ -1.51
Ddx55Q6ZPL9 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm14933-201ENSMUST00000118840 481 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm15659-201ENSMUST00000118881 341 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm14162-201ENSMUST00000121985 601 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm24532-201ENSMUST00000157951 286 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm25923-201ENSMUST00000158312 138 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm3084-201ENSMUST00000169967 598 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm18417-201ENSMUST00000176564 648 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Mir6907-201ENSMUST00000183764 71 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm43441-201ENSMUST00000201458 205 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm18487-201ENSMUST00000215826 878 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm9628-201ENSMUST00000222169 725 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm18388-201ENSMUST00000222339 557 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm2544-201ENSMUST00000222702 756 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.6□□□□□ -1.51
Ddx55Q6ZPL9 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx55Q6ZPL9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms